FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004998687

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004998687
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32841052
Sequences flagged as poor quality0
Sequence length50
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGAAGA202950.06.47945744
TAGATCG92550.06.211798744
ATCGGAA257700.06.17129244
GATCGGA295750.06.09230844
ACACGTC49050.06.06244944
CGTCTGA35350.05.85722344
TCGGAAG229500.05.854643344
AGATCGG346650.05.845880544
CAGATCG129500.05.579013344
GATCGGG13202.6193447E-105.33985444
Produced by FastQC (version 0.11.5)