FastQCFastQC Report
Fri 1 Jul 2022
EGAF00004998954

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004998954
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62723581
Sequences flagged as poor quality0
Sequence length51
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTGGACCTCCTGTGCAAGAACATGAAACACCTGTGGTTCTTCCTCCTGCT1093460.17432997009529796No Hit
TTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAA988260.15755796850948292No Hit
CTGGGAGGTCACTCTCCCCAGGCTCTGTCCAAGTGGCATAGGGGAGCTTAG729380.11628481479716536No Hit
CATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCG705240.11243618249410857No Hit
CTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAAAAC688200.1097195008684214No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)