EGAF00004999023 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004999023
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	35125637
Sequences flagged as poor quality	0
Sequence length	51
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAA	96035	0.27340429441891684	No Hit
CATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCG	94457	0.2689118492000586	No Hit
CTGGGAGGTCACTCTCCCCAGGCTCTGTCCAAGTGGCATAGGGGAGCTTAG	55593	0.15826901587578326	No Hit
CAGGGATCATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAG	43427	0.12363334506930082	No Hit
GTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCT	43012	0.12245187183366953	No Hit
CTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAAAAC	42805	0.12186255867758355	No Hit
ATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGA	41529	0.11822988434344976	No Hit
GTTTCTCTGAACGTGTAGAGCACCGAAAACCACGAGGAAGAGAGGTAGCGT	39734	0.11311965673391204	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGCTTAG	15785	17.217894	45
GGGAGGT	24590	15.621931	3
GTCAGGA	16615	15.416696	1
GGCATAG	17895	15.274913	35
ATAGGGG	17885	15.271592	38
GGAGGTC	25120	15.050595	4
GGTCACT	24500	14.981192	7
GTCACTC	25865	14.363664	8
TGGCATA	19255	14.347984	34
GAGCTTA	19405	14.28412	44
CATAGGG	19670	14.045829	37
AGGGATC	16585	13.975953	2
ACTCTCC	27805	13.369143	11
GCATAGG	20910	13.201713	36
GTTGTCG	1840	12.960569	26
TATCCTA	8240	12.78138	5
TCTCCCC	29005	12.707294	13
CAGGGAT	20220	12.389774	1
GCTCTGT	29705	12.323609	22
TGGGAGG	23850	12.266331	2