Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004999151 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 40983208 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AGCTTAG | 9110 | 0.0 | 11.9773035 | 45 |
ATAGGGG | 9530 | 0.0 | 11.538141 | 38 |
TAGCACG | 2085 | 0.0 | 10.673855 | 29 |
GGCATAG | 9720 | 0.0 | 10.64149 | 35 |
TCAGACG | 6515 | 0.0 | 10.611511 | 2 |
CGTGGCG | 12370 | 0.0 | 9.959969 | 1 |
GGCGACC | 12680 | 0.0 | 9.716504 | 4 |
CATAGGG | 11280 | 0.0 | 9.668295 | 37 |
CGGCTAA | 7880 | 0.0 | 9.642404 | 31 |
GAGCTTA | 11780 | 0.0 | 9.491193 | 44 |
CGACCCG | 13975 | 0.0 | 9.312303 | 6 |
TGGCGAC | 13450 | 0.0 | 9.261083 | 3 |
GCATAGG | 11740 | 0.0 | 9.15545 | 36 |
GTCACTC | 14675 | 0.0 | 9.144051 | 8 |
GTGGCGA | 13425 | 0.0 | 9.108332 | 2 |
GGGAGGT | 17275 | 0.0 | 9.062035 | 3 |
AGACTCA | 13675 | 0.0 | 9.042467 | 4 |
GCGACCC | 13760 | 0.0 | 9.019028 | 5 |
TAATCGG | 3975 | 0.0 | 8.952862 | 4 |
GGAGGTC | 15855 | 0.0 | 8.878829 | 4 |