FastQCFastQC Report
Sat 4 Jun 2022
EGAF00004999396

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004999396
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63074457
Sequences flagged as poor quality0
Sequence length51
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGAAACAGAGTCGTGGAGGCTTTGAATCTCTCAGAAAAAAGGAAAGACAG2002400.3174660702984728No Hit
GGGGAAACAGAGTCGTGGAGGCTTTGAATCTCTCAGAAAAAAGGAAAGACA881410.1397411950767963No Hit
GTGCAAATTAAATTCAGAAGGGACGGGGGAAACAGAGTCGTGGAGGCTTTG657950.1043132246069118No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)