EGAF00004999427 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004999427
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	50796902
Sequences flagged as poor quality	0
Sequence length	51
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAAAAC	169130	0.332953375778704	No Hit
TTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAA	127771	0.2515330560907041	No Hit
CCGAAAACCACGAGGAAGAGAGGTAGCGTTTTCTCCTGAGCGTGAAGCCGG	107297	0.21122744847707442	No Hit
GTTTCTCTGAACGTGTAGAGCACCGAAAACCACGAGGAAGAGAGGTAGCGT	82570	0.16254928302517346	No Hit
CTCTGAACGTGTAGAGCACCGAAAACCACGAGGAAGAGAGGTAGCGTTTTC	79671	0.15684224207216416	No Hit
CATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCG	69931	0.13766784438940785	No Hit
TCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAAAA	65410	0.1287676953212619	No Hit
CAGGGATCATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAG	55196	0.10866016986626469	No Hit
CGAAAACCACGAGGAAGAGAGGTAGCGTTTTCTCCTGAGCGTGAAGCCGGC	51969	0.1023074202438566	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTTGTCG	3740	17.385605	26
AGGGATC	17520	17.15353	2
ATATAGC	5345	14.818489	6
TGTCGTT	4620	14.512654	28
CAGGGAT	23085	14.275827	1
GGGATCA	22640	14.099247	3
TATAGCT	5750	14.009825	7
TTTCTAT	55385	13.042705	1
GGATCAT	24685	12.694133	4
TTCTATA	56795	12.55687	2
TTGTCGT	5600	12.133818	27
AAGCCGG	46095	11.965809	45
TCTATAG	60125	11.629002	3
GCGTGAA	47610	11.61313	40
GTCGTTC	5610	11.470066	29
GCGTTCG	3295	11.403415	15
CGTAGGG	4890	11.227356	36
AGCGTGA	49300	11.174541	39
CTATAGT	80110	11.164054	1
AATATAG	8215	11.125504	5