EGAF00004999487 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004999487
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	34132977
Sequences flagged as poor quality	0
Sequence length	51
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGAT	455407	1.3342141237783038	No Hit
CCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGATCATCAA	40146	0.11761646222654414	No Hit
CAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGATCA	38375	0.11242793149862083	No Hit
CTCAACTTTCTTGTCCACCTTGGTGTTGCTGGGCTTGTGATTCACGTTGCA	37853	0.1108986186584311	No Hit
GTCGGAGTCCAGCACGGGAGGCGTGGTCTTGTAGTTGTTCTCCGGCTGCCC	37328	0.10936051666398743	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCAGACC	63620	35.825645	2
CAGACCG	63250	35.626087	3
CTCAGAC	66215	35.401943	1
AGACCGC	63840	35.307156	4
ACCGCGT	67575	33.385387	6
GACCGCG	70545	31.982693	5
CCGCGTT	72215	31.237083	7
CGCGTTC	74460	30.267723	8
GCGTTCT	75840	29.7585	9
GAACGAT	76260	28.767546	45
AATACGG	78015	28.35904	32
ATACGGA	77940	28.351727	33
TACGGAG	77870	28.284792	34
CGTTCTC	80440	28.196638	10
AGAACGA	78175	28.181187	44
CAATACG	78960	28.016867	31
CCCAATA	80130	27.784563	29
AAGAACG	79460	27.719948	43
CCAATAC	81740	27.278551	30
CGGAGAG	80565	27.252096	36