FastQCFastQC Report
Thu 12 May 2022
EGAF00004999509

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004999509
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences80299205
Sequences flagged as poor quality0
Sequence length51
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGAT8999901.1207956542035502No Hit
CCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGATCATCAA1540330.19182381693567202No Hit
CTCAGACCGCGTTCTCTCCCTCTTACTCCCCAATACGGAGAGAAGAACGAT1038970.12938733328679905No Hit
CTCAGACCGCGTTCTCTCTCTCTCACTCCCCAATACGGAGAGAAGAACGAT806780.10047172945236507No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)