FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004999530

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004999530
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51436536
Sequences flagged as poor quality0
Sequence length51
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGAT6191521.2037202505238689No Hit
CCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGATCATCAA775630.15079359154356742No Hit
CAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGATCA599180.11648918193091384No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)