FastQCFastQC Report
Thu 23 Mar 2023
EGAF00004999579

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004999579
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences95804924
Sequences flagged as poor quality0
Sequence length51
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAAAAC1918830.20028511269420765No Hit
TTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAA1328540.13867136933379332No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)