FastQCFastQC Report
Sat 4 Jun 2022
EGAF00004999583

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004999583
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67423811
Sequences flagged as poor quality0
Sequence length51
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAA2357980.3497251141736856No Hit
CTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAAAAC1685570.24999625132432812No Hit
CATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCG1196760.1774981245127185No Hit
TCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAAAA1002270.1486522320727317No Hit
CAGGGATCATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAG947010.14045631446137033No Hit
CTGGGAGGTCACTCTCCCCAGGCTCTGTCCAAGTGGCATAGGGGAGCTTAG814110.12074517710071299No Hit
GTTTCTCTGAACGTGTAGAGCACCGAAAACCACGAGGAAGAGAGGTAGCGT766790.11372688500209517No Hit
GTTTCTCTGAACGTGTAGAGCACCGAAAACCACGAGGAAGAGAAGTAGCGT676010.10026279885009762No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)