FastQCFastQC Report
Fri 1 Jul 2022
EGAF00004999617

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004999617
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45766865
Sequences flagged as poor quality0
Sequence length51
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAA703940.15380996710174488No Hit
CTGGGAGGTCACTCTCCCCAGGCTCTGTCCAAGTGGCATAGGGGAGCTTAG621530.13580349014510826No Hit
CTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAAAAC485290.10603522876211863No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)