EGAF00004999737 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004999737
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	44131136
Sequences flagged as poor quality	0
Sequence length	51
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAAAAC	133915	0.3034478876773079	No Hit
TTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAA	123118	0.27898216805477205	No Hit
GTTTCTCTGAACGTGTAGAGCACCGAAAACCACGAGGAAGAGAGGTAGCGT	70810	0.16045360808296438	No Hit
CATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCG	68841	0.15599190557886386	No Hit
CCGAAAACCACGAGGAAGAGAGGTAGCGTTTTCTCCTGAGCGTGAAGCCGG	68772	0.15583555338344338	No Hit
TCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAAAA	62620	0.14189528227870682	No Hit
CAGGGATCATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAG	61632	0.1396565001181932	No Hit
CTCTGAACGTGTAGAGCACCGAAAACCACGAGGAAGAGAGGTAGCGTTTTC	57450	0.1301801974914038	No Hit
CTGGGAGGTCACTCTCCCCAGGCTCTGTCCAAGTGGCATAGGGGAGCTTAG	52117	0.11809575896709297	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGGGATC	16880	19.609268	2
GTTGTCG	2720	18.773384	26
CAGGGAT	22135	16.092672	1
GGGATCA	21340	15.786136	3
ATATAGC	3860	14.63712	6
TGTCGTT	3415	14.623366	28
GCGTTCG	4130	14.109867	15
GTCACTC	29165	14.099971	8
GGATCAT	23620	14.061562	4
GGGAGGT	31810	13.818306	3
CCGCGTT	4525	13.376634	13
CGCGTTC	4490	13.279918	14
CGTCGAT	2955	13.174173	12
ACCCGGC	8365	12.920505	5
GGAGGTC	33125	12.902141	4
ATAGGGG	20330	12.669547	38
GGCATAG	20425	12.6218605	35
GGTCACT	33335	12.613605	7
CGTTCGC	4675	12.560773	16
TATAGCT	4570	12.510662	7