FastQCFastQC Report
Thu 12 May 2022
EGAF00004999761

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004999761
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences52372110
Sequences flagged as poor quality0
Sequence length51
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAA961520.18359390141050266No Hit
CTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAAAAC620320.11844472181854043No Hit
CCGAAAACCACGAGGAAGAGAGGTAGCGTTTTCTCCTGAGCGTGAAGCCGG579290.1106103993136805No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)