FastQCFastQC Report
Sun 5 Jun 2022
EGAF00004999787

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004999787
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53202112
Sequences flagged as poor quality0
Sequence length51
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAAAAC727200.13668630297985163No Hit
GTTTCTCTGAACGTGTAGAGCACCGAAAACCACGAGGAAGAGAGGTAGCGT548950.10318199397798343No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)