FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005000112

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005000112
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences735702
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTAACT2952.1846041E-417.1409511
GGTTCAT5700.002633541610.1385081
TATAGCA5950.00386478479.6795117
CCATGAT8457.8919507E-48.5487421
CATGATA8600.0090232197.53602932
ATTCCAT11803.411469E-47.34612231
CCATATT10550.0071796366.82568174
CTTTTAT15259.195036E-46.15789751
CATTTCC14450.00351983225.97892865
Produced by FastQC (version 0.11.5)