FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005000158

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005000158
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences105691612
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG645750.06.2083187145
GATCGGA601550.06.1462717145
TCGGAAG640550.05.851279145
TAGATCG250250.05.62006145
ATCGGAA626300.05.532976145
ACGTCCG158900.05.1098413145
CGGAAGA678250.05.098493145
Produced by FastQC (version 0.11.5)