FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005000170

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005000170
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences107127149
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG184650.08.24322445-49
CTCGTAT222300.07.068713740-44
CGTATGC225100.06.903508740-44
TCTCGTA225200.06.60434240-44
ATGCCGT250350.06.340502345-49
TCGTATG255000.06.33848340-44
TGCCGTC264400.06.228363545-49
TATCTCG249650.06.00983235-39
GCCGTCT272400.05.98158645-49
AGATCGG837400.05.6606975145
GATCGGA800300.05.2981977145
TAGATCG309450.05.1998115145
ATCGGAA846100.05.174166145
ACACGTC609350.05.102883145
Produced by FastQC (version 0.11.5)