FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005000295

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005000295
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences107553553
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG76750.06.798892145
CGTCGTG360700.06.4698424145
AGCGTCG393450.06.373391145
GATCGGA627150.06.2518687145
AGATCGG683350.05.7695208145
GCGTCGT360400.05.5864406140-144
ATCGGAA657700.05.3333673145
TCGGAAG671350.05.116976145
Produced by FastQC (version 0.11.5)