FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005000339

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005000339
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences113101643
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG95950.08.006765145
CGCCGTA153700.06.875551745-49
AGCGTCG541950.06.1123769
CGTCGTG498500.06.091792145
AGATCGG873350.05.8007617145
GATCGGA811500.05.662353145
GAGCGTC662200.05.5927825145
GCCGTAT209350.05.38716845-49
GCGTCGT501200.05.243352140-144
ATCGGAA855550.05.09126145
TCGTGTA523150.05.0843573145
TCGGAAG884200.05.057441145
GTCGCCG218000.05.05454940-44
Produced by FastQC (version 0.11.5)