FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005000527

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005000527
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences99691955
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG92500.07.6029735145
AGCGTCG561950.05.754276145
CGTCGTG517950.05.6131935145
GAGCGTC672650.05.5617833145
TCGTGTA516950.05.441726145
AGATCGG891050.05.37026145
GTCGTGT542750.05.289917145
GCGTCGT520500.05.2598634140-144
GATCGGA841750.05.047403145
Produced by FastQC (version 0.11.5)