FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005000556

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005000556
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences106840090
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA556150.07.6961581
ATCGGAA588150.07.43680522
TCGGAAG602150.07.41655873
CGGAAGA640750.06.92449954
TATGCCG158300.06.38547845-49
AGATCGG578000.05.88208145
CGTTTCG170650.05.86251230-34
CGTATGC189750.05.577962440-44
CTCGTAT191600.05.44086440-44
TCTCGTA192150.05.13101240-44
TTCGATC194600.05.02148235-39
Produced by FastQC (version 0.11.5)