FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005000557

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005000557
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences106840090
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCGTC513150.08.4905479
AGAGCGT595300.07.3446358
GATCGGA616650.07.05638651
ATCGGAA651650.06.81607152
TCGGAAG669550.06.5867453
CGCCGTA150200.06.427208445-49
AAGAGCG715350.06.23376667
CGGAAGA719900.06.10381274
GCGTCGG79550.05.4725804145
AGATCGG643950.05.2506723145
TCGCCGT175950.05.124119345-49
CGTCGTG383550.05.1076703145
GCCGTAT204700.05.027575545-49
AGCGTCG412200.05.016698145
Produced by FastQC (version 0.11.5)