FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005000581

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005000581
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences112831715
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG114950.08.32246145
CGTCGTG800400.06.374592145
AGCGTCG877200.05.9652047145
TCGTGTA770200.05.834115145
GCGTCGT813050.05.6817565140-144
GTCGTGT817300.05.5865774145
CGTGTAG794850.05.4981794145
GATCGGA1290500.05.464389145
AGATCGG1384150.05.408838145
ATCGGAA1304800.05.332294145
GAGCGTC1023700.05.224809145
Produced by FastQC (version 0.11.5)