FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005000733

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005000733
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61494121
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG167750.07.424733645-49
CGTATGC188950.06.5379745-49
CTCGTAT188250.06.439033540-44
TCTCGTA182150.06.32830440-44
ATGCCGT199400.06.20260545-49
ATCGGAA650750.05.84041742
GATCGGA637200.05.81020831
TCGGAAG658950.05.8089653
GCCGTCT214250.05.765888750-54
CGGAAGA673700.05.7355894
ATCTCGT219100.05.380189440-44
AGATCGG656150.05.369714145
CGTCTTC243550.05.250829750-54
CCGTCTT255100.05.018774550-54
Produced by FastQC (version 0.11.5)