FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005000768

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005000768
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65018422
Sequences flagged as poor quality0
Sequence length151
%GC42

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG68100.08.942444145
AGCGTCG375950.05.8430095145
GATCGGA564650.05.6364965145
CGTCGTG339650.05.5069623145
AGATCGG607100.05.5050945145
GAGCGTC461400.05.3736897145
GCGTCGT343950.05.1049533140-144
TCGGAAG593500.05.0815554145
TCGTGTA341450.05.010822145
Produced by FastQC (version 0.11.5)