FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005000771

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005000771
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences75746799
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG105050.06.90935245-49
GATCGGA311250.06.8259611
ATCGGAA338950.06.4778122
TCGGAAG352900.06.24045853
CGTATGC118600.05.863435745-49
AGATCGG328950.05.858713145
CGGAAGA379700.05.8190274
CTCGTAT127250.05.635936340-44
TCTCGTA127900.05.460031540-44
Produced by FastQC (version 0.11.5)