FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005000804

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005000804
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61474969
Sequences flagged as poor quality0
Sequence length151
%GC42

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA66350.07.843858255-59
GCCGTAT93850.05.869830655-59
TCGCCGT92000.05.76725955-59
GCGTCGG59200.05.559642145
GCGTCGT240000.05.363613145
GAGCGTC323150.05.2946139
AGATCGG386550.05.279035145
GTCGTGT267800.05.1618724145
CGTCGTG239900.05.1219463145
AGCGTCG252100.05.0328226140-144
Produced by FastQC (version 0.11.5)