FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005000883

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005000883
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71625824
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGACGC36050.07.313238625-29
CGACGCT40500.06.97466325-29
ATCGGAA461000.06.2868147145
CACGACG45050.06.270220820-24
AGATCGG478550.05.9956937145
GATCGGA443800.05.9753776145
GTTGGAC295450.05.54347232
TCGGAAG472400.05.383551145
CGGAAGA496650.05.266576145
ACGTCTG363650.05.140528145
TAGATCG178950.05.0918264140-144
ACACGTC330700.05.061152145
Produced by FastQC (version 0.11.5)