FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005000907

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005000907
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66260275
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG124700.010.90696845-49
GATCGGA494150.010.2604521
ATCGGAA515650.09.8989072
TCGGAAG524500.09.7315573
CGTATGC143250.09.51482745-49
CGGAAGA540350.09.4988424
CTCGTAT146700.09.142488540-44
TCTCGTA150100.08.72287840-44
ATGCCGT160400.08.50653945-49
GCCGTCT171400.08.07889950-54
ATCTCGT185850.07.161976340-44
CGTCTTC209950.06.947711550-54
CCGTCTT214200.06.7218650-54
TCGTATG162650.06.588067545-49
TGCCGTC168950.06.41094550-54
CATCTCG221200.06.312391840-44
AGAGCAC865650.06.22230348
AGATCGG495200.06.031507145
GAGCACA927200.05.8952559
GAAGAGC979650.05.63883456
Produced by FastQC (version 0.11.5)