FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005000917

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005000917
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences48932174
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG70900.07.501758645-49
TAGATCG121700.06.3136563145
ATCGGAA322900.06.2632794145
CTCGTAT85350.06.11307240-44
GATCGGA305850.05.9962215145
CGTATGC86750.05.86382345-49
TCTCGTA83650.05.700205340-44
AGATCGG322650.05.6166067145
ATGCCGT102150.05.40542545-49
ACACGTC226900.05.399056145
CGGAAGA338700.05.371854145
CGGCGAC30051.85504E-65.31916431
TCGGAAG332300.05.137749140-144
Produced by FastQC (version 0.11.5)