FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005000920

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005000920
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66637420
Sequences flagged as poor quality0
Sequence length151
%GC41

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG54250.06.9495883145
AGCGTCG231950.05.6576967145
TCGCGAC25051.4932259E-55.4992228145
CGTCGTT27451.2159744E-55.282544145
AGATCGG385600.05.1895237145
TAGATCG154100.05.175419145
GATCGGA353150.05.1531167145
CGTCGTG218900.05.067586145
Produced by FastQC (version 0.11.5)