FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005000938

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005000938
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64450999
Sequences flagged as poor quality0
Sequence length151
%GC42

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG375700.09.9185859
GAGCGTC442200.08.5099428
AGAGCGT489900.07.666557
ATCGGAA529150.07.09801341
CGCCGTA145600.06.959820745-49
TCGGAAG546100.06.9565342
AAGAGCG583950.06.5932396
CGGAAGA578050.06.57219553
GCGTCGG64300.06.426414145
GCCGTAT170350.06.13585945-49
CCGTATC193150.05.524148545-49
CGTATCA195650.05.40169445-49
GTCGCCG196950.05.336977540-44
TGGTCGC207800.05.128083740-44
CGTCGTG344200.05.096937145
Produced by FastQC (version 0.11.5)