FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005000973

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005000973
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences70914713
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGCGAC45650.09.5893291
GCGACCA61850.07.38113743
GGCGACC74600.05.92734052
CGACCAC79350.05.84433364
AGATCGG451550.05.746796145
GATCGGA419750.05.6295743145
TAGATCG174800.05.556637145
ATCGGAA434150.05.2758923145
CGGAAGA475000.05.173146145
ACACGTC321000.05.103311145
CGTCTGA294100.05.0032206145
Produced by FastQC (version 0.11.5)