FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005000983

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005000983
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54724656
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG89300.06.916846345-49
AGATCGG425750.06.1811514145
TAGATCG156300.06.076168145
ATCGGAA421950.05.9790983145
CTCGTAT105800.05.783301440-44
CGTATGC106450.05.76162145-49
TCTCGTA105900.05.517740-44
TCGGAAG425250.05.5065002145
CGTCTGA271750.05.38889145
GATCGGA405800.05.3773947145
Produced by FastQC (version 0.11.5)