FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005000993

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005000993
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences58881324
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG404350.05.683663145
TCGGAAG397200.05.183649145
GATCGGA375750.05.0743833145
TATGCCG81450.05.03819245-49