FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005001006

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005001006
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65354948
Sequences flagged as poor quality0
Sequence length151
%GC42

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA80200.08.1896555-59
CGCGATA16605.215918E-56.5518994145
TCGCCGT103100.06.52530555-59
GCCGTAT110750.06.2054955-59
GCGTCGG67900.05.7664437145
GAGCGTC326000.05.71583949
AGATCGG398800.05.563529145
GTCGCCG127850.05.341480755-59
AGCGTCG260050.05.26950039
GATCGGA369150.05.16912271
AGAGCGT369150.05.10668338
CGTCGTG236100.05.036536145
CGTATCA142550.05.01457460-64
Produced by FastQC (version 0.11.5)