FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005001047

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005001047
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61647582
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG129100.011.70215345-49
GATCGGA564500.010.7893341
ATCGGAA577150.010.776142
TCGGAAG586400.010.6686543
CGGAAGA595150.010.3778164
CTCGTAT151500.09.77100240-44
TCTCGTA152350.09.5356740-44
CGTATGC153200.09.46379945-49
ATGCCGT168500.08.81098345-49
GCCGTCT180050.08.18145650-54
ATCTCGT190000.07.615578740-44
TCGTATG168550.07.561090545-49
TGCCGTC171650.07.475314650-54
CGTCTTC212750.07.380552350-54
AGAGCAC910100.07.19269238
GAGCACA950550.07.0010089
CCGTCTT223100.06.830195450-54
GAAGAGC1002900.06.56328156
CATCTCG228950.06.35164640-44
AGATCGG566300.05.5430026145
Produced by FastQC (version 0.11.5)