FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005001053

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005001053
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69005533
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG107300.06.37837845-49
AGATCGG501700.05.8235064145
GATCGGA476650.05.7341013145
TAGATCG180050.05.7176666145
CTCGTAT131200.05.205540740-44
TCTCGTA131750.05.128780440-44
TCGGAAG499150.05.1270466145
ACACGTC356350.05.1064672145
ATCGGAA489950.05.1049438145
CGTATGC126750.05.09072945-49
Produced by FastQC (version 0.11.5)