FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005001092

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005001092
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences123652656
Sequences flagged as poor quality0
Sequence length151
%GC41

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCGTC534200.05.52306949
CGCCGTA126650.05.36894255-59
AGATCGG675350.05.068376145
AGCGTCG421700.05.0559115145
Produced by FastQC (version 0.11.5)