FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005001095

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005001095
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69472693
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG95100.07.119849745-49
GATCGGA309450.06.8571211
AGATCGG326250.06.621969145
ATCGGAA332350.06.5050122
CGTATGC112550.06.24785245-49
TCGGAAG349700.06.1576023
CTCGTAT112050.06.004065540-44
CGGAAGA371950.05.9646874
TAGATCG130000.05.744011145
TCTCGTA116650.05.68029440-44
Produced by FastQC (version 0.11.5)