FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005001172

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005001172
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences80056715
Sequences flagged as poor quality0
Sequence length151
%GC41

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA241100.09.6085641
GAGCGTC253850.09.1604319
ATCGGAA278450.08.5568142
AGAGCGT304800.07.7234018
TCGGAAG307800.07.67074633
CGGAAGA346150.07.0074944
AAGAGCG381600.06.35716067
CGCCGTA91250.05.961548355-59
Produced by FastQC (version 0.11.5)