FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005001315

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005001315
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63067670
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG153900.013.59575145-49
GATCGGA447600.013.5927821
ATCGGAA486100.012.8420992
TCGGAAG490950.012.7004783
CGGAAGA510400.012.2155464
CTCGTAT173650.012.13246640-44
TCTCGTA169550.011.92128940-44
CGTATGC170700.011.53564145-49
ATGCCGT191550.011.02185445-49
TATCTCG182150.010.35634140-44
GCCGTCT207700.09.577785550-54
ATCTCGT206600.09.43250940-44
CGTCTTC248450.08.78887950-54
CCGTCTT249800.08.33507450-54
AGAGCAC829750.07.87223058
GAGCACA887850.07.47139649
GAAGAGC924450.07.21489766
TCGTATG193100.06.780800345-49
GTATGCC323000.06.742840345-49
TGCCGTC202800.06.420308650-54
Produced by FastQC (version 0.11.5)