FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005001365

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005001365
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65050702
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG104700.010.29053245-49
CTCGTAT126150.08.41315940-44
TCTCGTA126700.07.97611640-44
GATCGGA425350.07.517481
CGTATGC125100.07.48808745-49
ATCGGAA442350.07.36342052
ATGCCGT149050.07.316131645-49
TCGGAAG455200.07.08920343
CGGAAGA476750.06.6905594
ACGACGC23401.05468644E-76.5058276
CGTGTAG176250.06.062919630-34
AGATCGG438150.06.0556397145
CCGTGTA183850.05.99367830-34
GCCGTCT152800.05.959997750-54
CGTCTTC204950.05.6958450-54
TAGATCG166050.05.4572377145
ATCTCGT165850.05.455121540-44
CACGACG31156.800492E-75.35265065
GTCACCG209400.05.220716525-29
CGACGCT27356.427211E-55.03611567
Produced by FastQC (version 0.11.5)