FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005001373

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005001373
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61229732
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA287150.09.45395851
TATGCCG87700.08.91102345-49
ATCGGAA311650.08.8239292
TCGGAAG316250.08.7342573
CGGAAGA344350.08.0841754
CTCGTAT108950.07.172933640-44
TCTCGTA108000.07.0212340-44
CGTATGC105450.06.957325545-49
ATGCCGT126000.06.213862445-49
TATCTCG115650.06.20575840-44
GCCGTCT134600.05.730712450-54
ATCTCGT142700.05.385018340-44
AGATCGG292950.05.320469145
Produced by FastQC (version 0.11.5)