FastQCFastQC Report
Fri 1 Jul 2022
EGAF00005001476

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005001476
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38699355
Sequences flagged as poor quality0
Sequence length149
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG610090.15764862230907983No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT540560.1396819145952174No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC413520.10685449408652935No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)