FastQCFastQC Report
Sat 11 May 2024
EGAF00005001502

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005001502
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24336555
Total Bases3.6 Gbp
Sequences flagged as poor quality0
Sequence length149
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG380410.15631218140776293No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT244820.10059764005217665No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)