FastQCFastQC Report
Sat 4 Jun 2022
EGAF00005001528

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005001528
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34985911
Sequences flagged as poor quality0
Sequence length149
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT577910.16518363635007247No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG516390.14759941509026306No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC351770.100546188435682No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)