FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005001582

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005001582
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24543671
Sequences flagged as poor quality0
Sequence length149
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT393090.16015941543544973No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG363850.14824595717568084No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA292400.11913458259768883No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC269210.1096861182664973No Hit
GCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGG256020.10431202406518568No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)