FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005001990

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005001990
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences787810
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGTTT7450.0022514258.79250051
CTTTGAG8500.0073903577.70636841
CACAAAA13351.6596248E-47.0874221
CTTGAAA16603.4884588E-46.1382721
CAAAAGA19203.619563E-45.68612241
Produced by FastQC (version 0.11.5)